Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-889 in CA Breast Richardson Cluster 67 Table contains all genes in the CA Breast Richardson cluster number 67. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-889 5922 RASA2 RAS p21 protein activator 2 [Source:HGNC Symbol;Acc:9872] zzz999 55127 HEATR1 HEAT repeat containing 1 [Source:HGNC Symbol;Acc:25517] zzz999 79608 RIC3 resistance to inhibitors of cholinesterase 3 homolog (C. elegans) [Source:HGNC Symbol;Acc:30338] T 11217 AKAP2 A kinase (PRKA) anchor protein 2 [Source:HGNC Symbol;Acc:372] T 54902 TTC19 tetratricopeptide repeat domain 19 [Source:HGNC Symbol;Acc:26006] zzz999 221074 SLC39A12 solute carrier family 39 (zinc transporter), member 12 [Source:HGNC Symbol;Acc:20860] zzz999 51348 KLRF1 killer cell lectin-like receptor subfamily F, member 1 [Source:HGNC Symbol;Acc:13342] T 57188 ADAMTSL3 ADAMTS-like 3 [Source:HGNC Symbol;Acc:14633] T 131831 FAM194A family with sequence similarity 194, member A [Source:HGNC Symbol;Acc:28602] zzz999 4438 MSH4 mutS homolog 4 (E. coli) [Source:HGNC Symbol;Acc:7327] T 56853 CELF4 CUGBP, Elav-like family member 4 [Source:HGNC Symbol;Acc:14015] zzz999 63826 SRR serine racemase [Source:HGNC Symbol;Acc:14398] zzz999 154007 SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12) [Source:HGNC Symbol;Acc:21368] T 118987 PDZD8 PDZ domain containing 8 [Source:HGNC Symbol;Acc:26974] zzz999 81624 DIAPH3 diaphanous homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:15480] zzz999 26235 FBXL4 F-box and leucine-rich repeat protein 4 [Source:HGNC Symbol;Acc:13601] T 55365 TMEM176A transmembrane protein 176A [Source:HGNC Symbol;Acc:24930] zzz999 148281 SYT6 synaptotagmin VI [Source:HGNC Symbol;Acc:18638] zzz999 123624 AGBL1 ATP/GTP binding protein-like 1 [Source:HGNC Symbol;Acc:26504] zzz999 4205 MEF2A myocyte enhancer factor 2A [Source:HGNC Symbol;Acc:6993] P T 151050 C2orf67 chromosome 2 open reading frame 67 [Source:HGNC Symbol;Acc:26310] P T 7579 ZSCAN20 zinc finger and SCAN domain containing 20 [Source:HGNC Symbol;Acc:13093] zzz999 10096 ACTR3 ARP3 actin-related protein 3 homolog (yeast) [Source:HGNC Symbol;Acc:170] T 3841 KPNA5 karyopherin alpha 5 (importin alpha 6) [Source:HGNC Symbol;Acc:6398] zzz999 26548 ITGB1BP2 integrin beta 1 binding protein (melusin) 2 [Source:HGNC Symbol;Acc:6154] zzz999 1501 CTNND2 catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein) [Source:HGNC Symbol;Acc:2516] P T 79856 SNX22 sorting nexin 22 [Source:HGNC Symbol;Acc:16315] T 1629 DBT dihydrolipoamide branched chain transacylase E2 [Source:HGNC Symbol;Acc:2698] T 257044 C1orf101 chromosome 1 open reading frame 101 [Source:HGNC Symbol;Acc:28491] zzz999 9836 LCMT2 leucine carboxyl methyltransferase 2 [Source:HGNC Symbol;Acc:17558] zzz999 25950 RWDD3 RWD domain containing 3 [Source:HGNC Symbol;Acc:21393] T 7813 EVI5 ecotropic viral integration site 5 [Source:HGNC Symbol;Acc:3501] T 56945 MRPS22 mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:14508] zzz999 2487 FRZB frizzled-related protein [Source:HGNC Symbol;Acc:3959] T 83852 SETDB2 SET domain, bifurcated 2 [Source:HGNC Symbol;Acc:20263] T 90480 GADD45GIP1 growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:HGNC Symbol;Acc:29996] zzz999 91584 PLXNA4 plexin A4 [Source:HGNC Symbol;Acc:9102] T 92912 UBE2Q2 ubiquitin-conjugating enzyme E2Q family member 2 [Source:HGNC Symbol;Acc:19248] zzz999 23205 ACSBG1 acyl-CoA synthetase bubblegum family member 1 [Source:HGNC Symbol;Acc:29567] T 4994 OR3A1 olfactory receptor, family 3, subfamily A, member 1 [Source:HGNC Symbol;Acc:8282] zzz999 121355 GTSF1 gametocyte specific factor 1 [Source:HGNC Symbol;Acc:26565] zzz999 29899 GPSM2 G-protein signaling modulator 2 [Source:HGNC Symbol;Acc:29501] zzz999 6121 RPE65 retinal pigment epithelium-specific protein 65kDa [Source:HGNC Symbol;Acc:10294] T 80264 ZNF430 zinc finger protein 430 [Source:HGNC Symbol;Acc:20808] zzz999 51175 TUBE1 tubulin, epsilon 1 [Source:HGNC Symbol;Acc:20775] zzz999 22823 MTF2 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:29535] P T 51168 MYO15A myosin XVA [Source:HGNC Symbol;Acc:7594] zzz999 847 CAT catalase [Source:HGNC Symbol;Acc:1516] T 28999 KLF15 Kruppel-like factor 15 [Source:HGNC Symbol;Acc:14536] zzz999 219749 ZNF25 zinc finger protein 25 [Source:HGNC Symbol;Acc:13043] zzz999 89890 KBTBD6 kelch repeat and BTB (POZ) domain containing 6 [Source:HGNC Symbol;Acc:25340] zzz999 23081 KDM4C lysine (K)-specific demethylase 4C [Source:HGNC Symbol;Acc:17071] zzz999 91614 DEPDC7 DEP domain containing 7 [Source:HGNC Symbol;Acc:29899] zzz999 5362 PLXNA2 plexin A2 [Source:HGNC Symbol;Acc:9100] zzz999 222698 NKAPL NFKB activating protein-like [Source:HGNC Symbol;Acc:21584] zzz999 123591 C15orf27 chromosome 15 open reading frame 27 [Source:HGNC Symbol;Acc:26763] zzz999 55327 LIN7C lin-7 homolog C (C. elegans) [Source:HGNC Symbol;Acc:17789] P T 7757 ZNF208 zinc finger protein 208 [Source:HGNC Symbol;Acc:12999] T 5121 PCP4 Purkinje cell protein 4 [Source:HGNC Symbol;Acc:8742] zzz999 64518 TEKT3 tektin 3 [Source:HGNC Symbol;Acc:14293] zzz999 84078 KBTBD7 kelch repeat and BTB (POZ) domain containing 7 [Source:HGNC Symbol;Acc:25266] zzz999 2596 GAP43 growth associated protein 43 [Source:HGNC Symbol;Acc:4140] zzz999 203102 ADAM32 ADAM metallopeptidase domain 32 [Source:HGNC Symbol;Acc:15479] zzz999 9671 WSCD2 WSC domain containing 2 [Source:HGNC Symbol;Acc:29117] zzz999 401427 OR2A7 olfactory receptor, family 2, subfamily A, member 7 [Source:HGNC Symbol;Acc:8234] zzz999 51438 MAGEC2 melanoma antigen family C, 2 [Source:HGNC Symbol;Acc:13574] zzz999 29078 NDUFAF4 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4 [Source:HGNC Symbol;Acc:21034] zzz999 57531 HACE1 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:21033] T 23097 CDK19 cyclin-dependent kinase 19 [Source:HGNC Symbol;Acc:19338] zzz999 6557 SLC12A1 solute carrier family 12 (sodium/potassium/chloride transporters), member 1 [Source:HGNC Symbol;Acc:10910] T 9435 CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 [Source:HGNC Symbol;Acc:1970] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.